Software and Programming
Software Modules A place to discuss the Lmod software module system. Python A place to discuss the Python programming language. Julia A place to discuss the Julia programming language. GPU A place to discuss GPU programming. MPI A place to discuss MPI programming. MATLAB A place to discuss the MATLAB programming language. R A place to discuss the R programming language. Singularity A place to discuss Singularity software containers.
Topic | Replies | Views | Activity | |
---|---|---|---|---|
About the Software and Programming category
The Software and Programming category is a place to discuss different programming languages (Python, R, MATLAB, etc.) and using them on CARC systems, the different software available to you, and navigating the Lmod softw… |
1 | 583 | August 13, 2020 | |
Is an OpenGL Simulation Possible? | 5 | 55 | April 28, 2024 | |
Python Environment Management | 1 | 91 | February 21, 2024 | |
Fail to load libgfortran.so.3 | 7 | 2539 | February 14, 2024 | |
Angsd mamba package not working | 3 | 166 | November 28, 2023 | |
Cannot import user-made python package within certain folders? | 3 | 290 | November 9, 2023 | |
Has anyone installed Alphafold2? | 2 | 844 | November 1, 2023 | |
SSH FS and VS Code | 0 | 193 | September 7, 2023 | |
Cuda driver version does not match cuda toolkit (nvcc) | 0 | 530 | September 1, 2023 | |
Use of mictools | 0 | 332 | August 31, 2023 | |
Display on CARC Servers | 1 | 171 | August 30, 2023 | |
Devtools in R Installation | 3 | 435 | August 25, 2023 | |
libXext.so.6 Java package error on RStudio | 4 | 612 | July 26, 2023 | |
RStudio Abnormally Terminated error | 1 | 430 | July 13, 2023 | |
Possible to use Quarto? | 2 | 413 | July 13, 2023 | |
Trouble installing modules via pip | 2 | 380 | July 7, 2023 | |
How to check GPU usage and memory | 2 | 651 | May 16, 2023 | |
Installing python modules | 1 | 320 | April 28, 2023 | |
Errors compiling c++ torch frontend with Boost library | 0 | 572 | April 24, 2023 | |
Unable to connect to discovery from VS code | 19 | 4301 | April 15, 2023 | |
Error during the installation of Bioinfo tool EthSEQ | 1 | 593 | January 30, 2023 | |
Error running python script after conda and gcc update | 1 | 1074 | January 27, 2023 | |
Error in sourcing local perl modules | 10 | 556 | January 12, 2023 | |
Error installing R package "SingleCellExperiment" | 6 | 1881 | November 27, 2022 | |
Installing devtools in R | 0 | 428 | October 2, 2022 | |
Unable to use Matlab on the cluster | 1 | 449 | September 27, 2022 | |
R package installation guide
A guide for installing R packages using the software modules available on CARC HPC clusters. The following instructions are based on the R 4.3.2 module: module purge module load gcc/11.3.0 module load openblas/0.3.20 m… |
1 | 3544 | September 22, 2022 | |
Unable to install packages | 4 | 2802 | August 5, 2022 | |
STAR Error: version incompatible with genome | 1 | 733 | June 22, 2022 | |
Installing software compiled with newer version of GLIBC | 0 | 942 | May 27, 2022 |